Information for 7-AGGCTCTGTGCAG (Motif 12)

C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G T A A T C G A T G C A G T C C G A T
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.888
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 14.3bp
Average Position of motif in Background63.2 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGCTCTGTGCAG-----
-NNGTATGTGCACATNNN
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGCTCTGTGCAG-----
-NTNTATGTGCACATNNN
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTCTGTGCAG--
NNGCGTGTGTGCNGCN
 A C G T C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGGCTCTGTGCAG
--WDNCTGGGCA-
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGGCTCTGTGCAG
----GCTGTG---
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGCTCTGTGCAG---
GGGCCGTGTGCAAAAA
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTCTGTGCAG--
NNNNTTGTGTGCTTNN
 A C G T C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGGCTCTGTGCAG--
-----CTGTTCCTGG
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGGCTCTGTGCAG-------
---NNNANTGCAGTGCNNTT
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGGCTCTGTGCAG
-GCGCCTGCGCA-
 C G T A A C T G A T C G T A G C A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T C G
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T