p-value: | 1e-16 |
log p-value: | -3.766e+01 |
Information Content per bp: | 1.667 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.26% |
Number of Background Sequences with motif | 52.6 |
Percentage of Background Sequences with motif | 0.11% |
Average Position of motif in Targets | 49.6 +/- 23.3bp |
Average Position of motif in Background | 44.6 +/- 31.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3-1/MA0124.2/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT -----TTAAGTGGT-- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT- -AATNTTAAGTGGNTNN |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT -----TTAAGTGGN-- |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 4 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT- -AAATTCAAGTGGNTTN |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT-- -NTNNTTAAGTGGNTNAN |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 6 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT-- -NTNNTTAAGTGGTTANN |
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ISL2/MA0914.1/Jaspar
Match Rank: | 7 |
Score: | 0.69 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT -----TTAAGTGC--- |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 8 |
Score: | 0.69 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT ----NTCAAGTGGN-- |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AYAWGCTAAGTGGATT- -AATTTCAAGTGGCTTN |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 10 |
Score: | 0.67 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AYAWGCTAAGTGGATT -----TTRAGTGSYK- |
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