Information for 3-TGGCTGGTACTTA (Motif 6)

A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A
Reverse Opposite:
A G C T C G T A C T G A A T C G C G A T C G T A A G T C A G T C C G T A C T A G G A T C A T G C C G T A
p-value:1e-17
log p-value:-4.054e+01
Information Content per bp:1.795
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 20.1bp
Average Position of motif in Background51.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGCTGGTACTTA----
-ACTTGCTACCTACACC
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGCTGGTACTTA----
-ACATGCTACCTAATAC
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGGCTGGTACTTA
--NTTGATACATT
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGGCTGGTACTTA------
--GTCGGTAATTATNGNGN
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGCTGGTACTTA--
-TGGAGGTAATTAAC
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A A C G T A C G T
A C G T C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGGCTGGTACTTA
CGTGGGTGGTCC---
 A C G T A C G T A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGGCTGGTACTTA------
--NNNGGTAATTATNGNGN
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGGCTGGTACTTA-
-----ACCACTTAA
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TGGCTGGTACTTA
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGGCTGGTACTTA-
------GCACTTAA
 A C G T A T C G C A T G G A T C G A C T A C T G T C A G A C G T C G T A A T G C A G C T A C G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A