Information for 17-TGTTTGGTGT (Motif 43)

C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T
Reverse Opposite:
G T C A A G T C C G T A G A T C A G T C G T C A C T G A C G T A G A T C C G T A
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.834
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif264.5
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets56.5 +/- 28.4bp
Average Position of motif in Background47.0 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGTGT--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGTGT--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGGTGT-
NNHTGTGGTTWN
 A C G T C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTTTGGTGT
CTGTCTGG---
 A C G T C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGGTGT
TTTGATTGATGN
 A C G T A C G T C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTTTGGTGT-------
TNNNNGGTGTCATNTNT
 C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTTTGGTGT--
----AGGTGTGA
 C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGTTTGGTGT
VBSYGTCTGG---
 A C G T A C G T A C G T C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGTTTGGTGT
-GTTTGTT--
 C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T
A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTGGTGT----
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T C G A T C T A G A C G T G A C T A C G T A C T G C T A G C G A T C T A G C A G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A