Information for 4-CTAKGTAAATATTTRC (Motif 4)

A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
Reverse Opposite:
C T A G G A T C G C T A C G T A G C T A A G C T C T G A C G A T A G C T C A G T T C G A G T A C G T A C C G A T C G T A T A C G
p-value:1e-19
log p-value:-4.488e+01
Information Content per bp:1.661
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif260.9
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets45.0 +/- 24.0bp
Average Position of motif in Background53.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CTAKGTAAATATTTRC
-TATGTAAATAT----
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CTAKGTAAATATTTRC
-TATGTAAATAT----
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTAKGTAAATATTTRC
-NNTNNCAATATTAG-
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTAKGTAAATATTTRC
-NNTNNCAATATTAG-
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTAKGTAAATATTTRC
-WAAGTAAAYA-----
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTAKGTAAATATTTRC
NCTAAGTAAACA-----
 A C G T A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAKGTAAATATTTRC
-TAAGTAAACAAA---
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAKGTAAATATTTRC
-AAAGTAAACA-----
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAKGTAAATATTTRC
CAAAGTAAACANNNN-
 A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTAKGTAAATATTTRC
NCWRWGTAAACANSV--
 A C G T A T G C G C A T G C T A C A T G C A T G A G C T G T C A C T G A C G T A G A C T C T G A C A G T G C A T C A G T C T A G G A T C
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T