Information for 12-GAGTTCWCAGWGT (Motif 28)

A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C C G A T A G T C A C G T A C T G C G T A A C T G C G T A C G T A G T A C A C G T A G T C
p-value:1e-11
log p-value:-2.551e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 14.6bp
Average Position of motif in Background70.9 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Vdr/MA0693.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAGTTCWCAGWGT---
GAGTTCATTGAGTTCA
 A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGTTCWCAGWGT------
NGAGGTCANNGAGTTCANNN
 A C G T A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGTTCWCAGWGT
-HTTTCCCASG--
 A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAGTTCWCAGWGT
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAGTTCWCAGWGT
---TTMACACCTT
 A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGTTCWCAGWGT
-ATTTCCAAGAA-
 A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GAGTTCWCAGWGT
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTCWCAGWGT-
AGNGTTCTAATGANN
 A C G T A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGTTCWCAGWGT
-NTTTCTNAGAAA
 A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GAGTTCWCAGWGT
---TGCCCAGNHW
 A C T G C G T A A C T G A C G T A C G T A G T C G C A T A G T C C G T A C T A G C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A