Information for 11-TGGCCTCTCAGTG (Motif 27)

A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.551e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 17.1bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCAGTG
TGACCTYA-----
 A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCAGTG
TGACCYCT-----
 A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCTCTCAGTG
NNNNTGACCTTTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGCCTCTCAGTG
-AGCCACTCAAG-
 A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCAGTG----
TGACCTCTCNNTGACCT
 A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTCTCAGTG----
BTGACCTCTNNHTGACCY
 A C G T A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCTCTCAGTG
NNNGTGACCTTTGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTCTCAGTG
GTGACCTT------
 A C G T A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGCCTCTCAGTG
TGACCTTTNCNT-
 A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTCTCAGTG
CTGACCTTTG----
 A C G T A C G T A C T G C T A G A G T C A G T C A C G T T A G C A C G T A G T C C G T A A C T G A C G T A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T