Information for 9-TGAACAGGWTGTW (Motif 24)

A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T
Reverse Opposite:
C G T A G T C A G T A C G C T A G C T A A G T C A T G C A C G T A C T G A G C T G A C T G T A C T G C A
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.665
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif217.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets55.6 +/- 27.2bp
Average Position of motif in Background49.0 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TGAACAGGWTGTW
--AACAGGAAGT-
 A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TGAACAGGWTGTW---
-GRACAGWMTGTYCTB
 A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TGAACAGGWTGTW---
-GAACADWATGTTCTT
 A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TGAACAGGWTGTW---
-GVACAGNMTGTYCTB
 A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGAACAGGWTGTW---
AGNACAGNCTGTTCTN
 A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGAACAGGWTGTW---
AGNACANNNTGTNCTN
 A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGAACAGGWTGTW---
GGGAACACAATGTTCCC
 A C G T A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGAACAGGWTGTW---
GGGTACATAATGTTCCC
 A C G T A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGAACAGGWTGTW---
GGGAACACGGTGTACCC
 A C G T A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGAACAGGWTGTW
--ANCAGGATGT-
 A C G T C A T G C T G A C T G A A G T C C G T A T A C G C T A G C G A T C G A T A C T G A C G T C G A T
A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T