Information for 12-AGMCTACRAWTCCCAR (Motif 16)

C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G
Reverse Opposite:
G A T C A C G T A C T G A C T G A C T G C G T A C G T A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G T C A G C T
p-value:1e-13
log p-value:-3.145e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.2 +/- 22.0bp
Average Position of motif in Background68.5 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AGMCTACRAWTCCCAR
--ACTACAATTCCC--
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AGMCTACRAWTCCCAR-----
-RACTACAACTCCCAGVAKGC
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGMCTACRAWTCCCAR-----
-AACTACAATTCCCAGAATGC
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGMCTACRAWTCCCAR-
-------HTTTCCCASG
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:AGMCTACRAWTCCCAR---
---------TGCCCAGNHW
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AGMCTACRAWTCCCAR------
-------ATTTCCCAGVAKSCY
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGMCTACRAWTCCCAR
BCAGACWA----------
 A C G T A C G T C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AGMCTACRAWTCCCAR
------CAAATCACTG
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGMCTACRAWTCCCAR--
-GNNNATTAATCCCTNCN
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G A C G T A C G T
A C G T C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGMCTACRAWTCCCAR--
-GANNATTAATCCCTNNN
 C T G A C T A G G T C A A G T C A G C T C G T A A G T C C T G A C G T A C G A T A C G T A G T C A G T C A G T C C G T A C T A G A C G T A C G T
A C G T C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A