Information for 9-RGSTGGAGCACAGAAA (Motif 13)

C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
Reverse Opposite:
A G C T A C G T G C A T G T A C C G A T C A T G C G A T A T C G T A G C A C G T A T G C G T A C C G T A A T C G A T G C G A T C
p-value:1e-13
log p-value:-3.145e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.7 +/- 18.2bp
Average Position of motif in Background46.6 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RGSTGGAGCACAGAAA---
---CGAAGCACACAAAATA
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RGSTGGAGCACAGAAA
---GGGAGGACNG---
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RGSTGGAGCACAGAAA
GRTGMTRGAGCC------
 A C G T A C G T C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RGSTGGAGCACAGAAA
---NWAACCACADNN-
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:RGSTGGAGCACAGAAA
--GTGGAT--------
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RGSTGGAGCACAGAAA--
-NNNAGATCAAAGGANNN
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:RGSTGGAGCACAGAAA
----AAACCACAGAN-
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:RGSTGGAGCACAGAAA
----AAACCACAGC--
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:RGSTGGAGCACAGAAA
---CGGAGC-------
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RGSTGGAGCACAGAAA--
-NANAGATCAAAGGGNNN
 C T A G T A C G A T G C C G A T A C T G A T C G C G T A A T C G T A G C G C T A G T A C C G T A A C T G C G T A G T C A T C G A A C G T A C G T
A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T