Information for 8-GRCTGGCCAAAATAAA (Motif 11)

A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T C T G A A G C T C A G T A G C T G A C T A C T G C T A G G T A C G A T C C T G A C A T G G A T C T A G C
p-value:1e-13
log p-value:-3.158e+01
Information Content per bp:1.691
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.1 +/- 20.9bp
Average Position of motif in Background53.3 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GRCTGGCCAAAATAAA----
----TGCCAAAATAAACANN
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0186.1_Tcf3_2/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GRCTGGCCAAAATAAA--
---AGCCGAAAAAAAAAT
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:GRCTGGCCAAAATAAA--
---------AAATAAACA
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GRCTGGCCAAAATAAA-----
----GTTCAAAAAAAAAATTC
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GRCTGGCCAAAATAAA--
------NCTAAGTAAACA
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GRCTGGCCAAAATAAA
----TGCCAA------
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GRCTGGCCAAAATAAA--
--------AAAGTAAACA
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GRCTGGCCAAAATAAA
--CGTGCCAAG-----
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GRCTGGCCAAAATAAA--
--------AAAGTAAACA
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GRCTGGCCAAAATAAA-----
---------AAACAAACATTC
 A T C G C T A G G T A C G A C T C A T G A C T G A G T C G T A C C G T A C T G A G C T A C T G A G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C