Information for 8-CTCGTAAAGT (Motif 10)

T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T
Reverse Opposite:
T C G A A G T C G A C T A G C T C G A T C T G A G A T C A T C G G C T A A C T G
p-value:1e-14
log p-value:-3.428e+01
Information Content per bp:1.684
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif9.31%
Number of Background Sequences with motif1469.4
Percentage of Background Sequences with motif3.11%
Average Position of motif in Targets51.7 +/- 26.4bp
Average Position of motif in Background50.7 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----CTCGTAAAGT--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CTCGTAAAGT--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTCGTAAAGT
GCTCGTAAAAA
 A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CTCGTAAAGT
GTCGTAAAAT
 T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

Hoxa11/MA0911.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTCGTAAAGT-
GGTCGTAAAATT
 A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTCGTAAAGT
GTCGTAAAAA
 T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTCGTAAAGT
GGTCGTAAAAT
 A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CTCGTAAAGT---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CTCGTAAAGT--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTCGTAAAGT
GGTCGTAAAAA
 A C G T T G A C C G A T T A G C C T A G G A C T G C T A C T G A C T G A T C A G A G C T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A