Information for 2-TATCCTAAGG (Motif 9)

G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G
Reverse Opposite:
T A G C T G A C A C G T G C A T C G T A A C T G C T A G C G T A G A C T C G T A
p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.697
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif7.32%
Number of Background Sequences with motif336.4
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets58.0 +/- 26.1bp
Average Position of motif in Background48.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TATCCTAAGG--
----CTAATKGV
 G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TATCCTAAGG-
ATGCCCTGAGGC
 A C G T G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATCCTAAGG-
WTGSCCTSAGGS
 A C G T G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TATCCTAAGG--
TATGCWAATBAV
 G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TATCCTAAGG--
WATGCAAATGAG
 G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TATCCTAAGG
TATGCAAAT-
 G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TATCCTAAGG-
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T A C G T G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TATCCTAAGG
TATGCAAAT-
 G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TATCCTAAGG-
TTATGCAAATTA
 A C G T G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATCCTAAGG
AATATGCAAATT
 A C G T A C G T G C A T C T G A G A C T G A T C A G T C G C A T C G T A C G T A A C T G A T C G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T