Information for 1-TGGAAGYTCTGCGTAG (Motif 5)

C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
Reverse Opposite:
A G T C C G A T T C G A T G A C T A C G G T A C G C T A A T C G G T C A C T A G T G A C A C G T A C G T G T A C A G T C C G T A
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.637
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif36.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets51.3 +/- 27.8bp
Average Position of motif in Background49.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAAGYTCTGCGTAG
TGGCAGTTGN------
 C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGGAAGYTCTGCGTAG
NNNTGGCAGTTGGTNN---
 A C G T A C G T A C G T C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGAAGYTCTGCGTAG
TGTCANYT--------
 C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TGGAAGYTCTGCGTAG
TGGCAGTTGG------
 C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAGYTCTGCGTAG
VBTGWCAGCB--------
 A C G T A C G T C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.48
Offset:5
Orientation:forward strand
Alignment:TGGAAGYTCTGCGTAG
-----GCTGTGGTTT-
 C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----TGGAAGYTCTGCGTAG
GATATTGACAGCTGCGT----
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TGGAAGYTCTGCGTAG
TTGGCA-----------
 A C G T C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TGGAAGYTCTGCGTAG
--AAATCACTGC----
 C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAGYTCTGCGTAG
NNTGGAAANN--------
 A C G T A C G T C G A T C T A G C A T G G T C A G T C A A C T G G A T C A C G T A T G C C G A T C A T G A T G C A C T G A G C T C G T A T C A G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T