Information for 13-AGTATTTMAAGAG (Motif 23)

C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G
Reverse Opposite:
G A T C A C G T A G T C G A C T G C A T C A T G T C G A C G T A G C T A C A G T C G T A G T A C C G A T
p-value:1e-7
log p-value:-1.653e+01
Information Content per bp:1.713
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif5.18%
Number of Background Sequences with motif234.0
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets43.2 +/- 29.0bp
Average Position of motif in Background52.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGTATTTMAAGAG-
---NTTTTACGAGN
 C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTATTTMAAGAG----
-NAATTTTACGAGNTNN
 C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGTATTTMAAGAG
---NTTTTACGAC
 C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTATTTMAAGAG----
-ANATTTTACGAGNNNN
 C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGTATTTMAAGAG
CNTTAAGTACTTAANG--
 A C G T A C G T A C G T A C G T A C G T C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTATTTMAAGAG-
--ANTTTTACGACC
 C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G A C G T
A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGTATTTMAAGAG
CTAATATTGCTAAA-
 A C G T A C G T C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGTATTTMAAGAG
CTAATATTGCTAAA-
 A C G T A C G T C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGTATTTMAAGAG
--ATTTCCAAGAA
 C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G
A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGTATTTMAAGAG
---NTTTTACGAC
 C G T A C A T G C G A T G T C A C A G T A C G T A G C T G T A C C G T A C T G A C T A G C G T A C T A G
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C