Information for 4-CVATGGAAGCTGAGCA (Motif 16)

A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
Reverse Opposite:
C G A T A T C G A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G C T A G T C G T A C C G T A C G A T A C T G A C T G
p-value:1e-8
log p-value:-2.022e+01
Information Content per bp:1.795
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 19.8bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CVATGGAAGCTGAGCA
----GWAAYHTGABMC
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CVATGGAAGCTGAGCA
----GWAAYHTGAKMC
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CVATGGAAGCTGAGCA
----NGAAGC------
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CVATGGAAGCTGAGCA
-----ANAGATAAGAA
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CVATGGAAGCTGAGCA
----GACAGCTGCAG-
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CVATGGAAGCTGAGCA---
----GGGCGATGACCAYTC
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CVATGGAAGCTGAGCA
----NNGAGATAAGA-
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CVATGGAAGCTGAGCA
----CGCAGCTGCG--
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CVATGGAAGCTGAGCA
-AATGGAAAAT-----
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CVATGGAAGCTGAGCA
----AACAGCTGCAG-
 A G T C T A G C C G T A C G A T A C T G C T A G C T G A C G T A A C T G G T A C C G A T A C T G C G T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T