Information for 6-AGCCTGAHCTTGTGGG (Motif 8)

C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
Reverse Opposite:
A G T C G T A C G T A C C G T A A G T C C G T A C T G A A C T G C G T A G A C T A G T C C G T A A C T G A C T G G T A C A C G T
p-value:1e-12
log p-value:-2.828e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 14.8bp
Average Position of motif in Background73.3 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCCTGAHCTTGTGGG
--BNTGDCCTTG----
 C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGAHCTTGTGGG
CAGCC------------
 A C G T C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGCCTGAHCTTGTGGG
----TGACCTTGAV--
 C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTGAHCTTGTGGG
NNNNATGACCTTGANTN
 A C G T C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCCTGAHCTTGTGGG
----TGACCTTGAN--
 C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGCCTGAHCTTGTGGG
----TGACCTTGAT--
 C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGCCTGAHCTTGTGGG
---ATGACCTTGA---
 C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGCCTGAHCTTGTGGG
--NATGACCTTGA---
 C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGCCTGAHCTTGTGGG
---NTGACCTTGA---
 C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AGCCTGAHCTTGTGGG
RRCATGYCHGGACWTGYYYN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T A C C G A T A C T G C T G A G A C T G T A C A G C T C G A T A C T G C G A T A C T G A C T G A C T G
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T