Information for 21-GTATATATATATA (Motif 28)

T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A
Reverse Opposite:
A C G T C G T A A G C T C T G A A C G T C G T A A C G T C G T A A G C T C G T A G C A T C G T A A G T C
p-value:1e-2
log p-value:-5.769e+00
Information Content per bp:1.819
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.5 +/- 30.3bp
Average Position of motif in Background49.6 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GTATATATATATA
NNTATANATATACN
 A C G T T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GTATATATATATA--
NANTTATATATAANGN
 A C G T T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTATATATATATA--
AYATGYATATGCATR
 T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GTATATATATATA-
ATGGGATATATCCGCCT
 A C G T A C G T A C G T T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTATATATATATA
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTATATATATATA
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTATATATATATA
--ATATTTACATA
 T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTATATATATATA
--ATATTTACATA
 T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTATATATATATA
-TTTGTTTACTTA
 T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

PB0019.1_Foxl1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTATATATATATA--
NNNTTTGTTTACATTTN
 A C G T A C G T T C A G A C G T C G T A A C G T C T G A A C G T C G T A A C G T C G T A A G C T C T G A G C A T C G T A A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A