Information for 17-CCGTSAMTKACAG (Motif 23)

A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T G T A C C G T A A C G T A C G T A T G C C G T A A G T C A C T G A C T G
p-value:1e-7
log p-value:-1.742e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.8 +/- 15.9bp
Average Position of motif in Background74.4 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CCGTSAMTKACAG--
---TGAGTGACAGSC
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCGTSAMTKACAG-
--NTGATTGACAGN
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCGTSAMTKACAG-
--BTGABTGACAGS
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CCGTSAMTKACAG-
------TTGACAGC
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGTSAMTKACAG------
--GATATTGACAGCTGCGT
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CCGTSAMTKACAG
------TTGACAG
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCGTSAMTKACAG------
---NNATTGACAGGTGCTT
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CCGTSAMTKACAG-
------TTGACAGG
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCGTSAMTKACAG--
-----VBTGWCAGCB
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCGTSAMTKACAG------
---GTATTGACAGGTNNTT
 A G T C A G T C T A C G A C G T A T C G C G T A T G A C A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T