Information for 15-CYAWCCAGCAGGA (Motif 21)

T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T T G A C G T A C C G A T A C T G A T G C A C G T A C T G A C T G C G A T G C A T C T G A A C T G
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.757
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif53.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets41.9 +/- 26.1bp
Average Position of motif in Background44.8 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CYAWCCAGCAGGA--
CCACACAGCAGGAGA
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CYAWCCAGCAGGA--
CCACACAGCAGGAGA
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CYAWCCAGCAGGA--
---CACAGCAGGGGG
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CYAWCCAGCAGGA----
--DCHCAGCAGGRGGCC
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CYAWCCAGCAGGA--
GAGCACAGCAGGACA
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CYAWCCAGCAGGA
---ACCACCTGTT
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A
A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CYAWCCAGCAGGA
--NNVCAGCTGB-
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A
A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CYAWCCAGCAGGA
--NAHCAGCTGD-
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CYAWCCAGCAGGA
--NAACAGCTGG-
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CYAWCCAGCAGGA---
------ANCAGGATGT
 T G A C G A C T C G T A G C T A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T