Information for 12-TAGTACACTGGRW (Motif 17)

A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
Reverse Opposite:
C G A T A G C T A G T C A G T C G T C A A C T G A C G T A C T G A C G T C G T A A G T C A C G T C G T A
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.872
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 27.3bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TAGTACACTGGRW
TATCATTAGAACGCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TAGTACACTGGRW
NNGATCTAGAACCTNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTACACTGGRW
--GAACAATGGN-
 A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGTACACTGGRW--
GTAGGTCACTGGGTCA
 A C G T A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TAGTACACTGGRW
ACTCCAAGTACTTGGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAGTACACTGGRW
-VRAACAATGG--
 A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAGTACACTGGRW
-AAAACAATGG--
 A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TAGTACACTGGRW
NGNTCTAGAACCNGV---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TAGTACACTGGRW
TTATTAGTACATAN---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TAGTACACTGGRW
--GAACAATGG--
 A C G T C G T A A C T G C G A T C G T A A G T C G T C A A G T C A C G T A C T G A C T G C T A G C G A T
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T