Information for 3-CCAGTCCAAC (Motif 5)

A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C
Reverse Opposite:
C T A G A G C T A C G T A C T G A C T G G T C A A G T C A C G T C T A G A T C G
p-value:1e-14
log p-value:-3.306e+01
Information Content per bp:1.849
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif65.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets43.2 +/- 18.5bp
Average Position of motif in Background47.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCAGTCCAAC--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAGTCCAAC------
NNAGTCCCACTCNNNN
 A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTCCAAC
ATGCCAGACN---
 A C G T A C G T A C G T A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAGTCCAAC-
GCCACRCCCACY
 A C G T A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGTCCAAC
CTAGGCCT--
 A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCAGTCCAAC
---TGCCAA-
 A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTCCAAC---
TCCCAGMCRAGCCCC
 A C G T A C G T A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCAGTCCAAC
GCCACGCCCCC
 A C G T A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAGTCCAAC-------
--CGACCAACTGCCGTG
 A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCAGTCCAAC-
GCCACGCCCACT
 A C G T A T G C A G T C G T C A A C T G C A G T A G T C G T A C G T C A C T G A A G T C A C G T
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T