Information for 9-KTCACCGTGA (Motif 30)

A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A T C G A C T G A C G T A C T G C G T A T G A C
p-value:1e-4
log p-value:-1.042e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.2 +/- 23.8bp
Average Position of motif in Background50.2 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR1/MA0112.3/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---KTCACCGTGA----
CAGGTCACCGTGACCTT
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---KTCACCGTGA--
NAGGTCACNNTGACC
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:KTCACCGTGA--
----NCGTGACN
 A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-KTCACCGTGA
NATGACCTTGA
 A C G T A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--KTCACCGTGA---
AGGTCACCCTGACCT
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:KTCACCGTGA-
ATGACCTTGAA
 A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:KTCACCGTGA-----
NNNACCGAGAGTNNN
 A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:KTCACCGTGA
NTGACCTTGA
 A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PPARG/MA0066.1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----KTCACCGTGA-----
AGTAGGTCACNGTGACCTAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KTCACCGTGA-
-TGACCTTGAV
 A C T G A C G T A G T C C G T A A G T C A T G C A C T G A C G T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A