Information for 16-YKAKAGATCACCA (Motif 28)

A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A
Reverse Opposite:
A C G T C A T G A C T G A C G T A C T G C G T A A C G T A G T C A C G T G T A C A C G T G T A C T C A G
p-value:1e-6
log p-value:-1.459e+01
Information Content per bp:1.885
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.2 +/- 29.6bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:YKAKAGATCACCA----
CATAAGACCACCATTAC
 A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:YKAKAGATCACCA
---AAGGTCAC--
 A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--YKAKAGATCACCA-
TCTCAAAGGTCACCTG
 A C G T A C G T A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:YKAKAGATCACCA---
-TAGTGATCATCATTA
 A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A A C G T A C G T A C G T
A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PH0016.1_Cux1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YKAKAGATCACCA--
ACCGGTTGATCACCTGA
 A C G T A C G T A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YKAKAGATCACCA-
TCTCAAAGGTCACGAG
 A C G T A C G T A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

CUX1/MA0754.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YKAKAGATCACCA
NTATCGATTA---
 A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:YKAKAGATCACCA
----AGATAASR-
 A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T

CUX2/MA0755.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YKAKAGATCACCA
TTATCGATTA---
 A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YKAKAGATCACCA
--AGRGGTCA---
 A G C T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G T A C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T