Information for 8-AAAGGACTTG (Motif 27)

T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G
Reverse Opposite:
T A G C G T C A C T G A A C T G A C G T A G T C G T A C A C G T A G C T A C G T
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.839
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif243.1
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets46.5 +/- 28.2bp
Average Position of motif in Background50.1 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAGGACTTG---
CTTTAAGTACTTAATG
 A C G T A C G T A C G T T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGGACTTG----
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGACTTG----
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGGACTTG----
TACTAAGTACTTAAATG
 A C G T A C G T A C G T T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAGGACTTG---
AGAAATGACTTCCCT
 A C G T A C G T T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAGGACTTG-
-AAGCACTTAA
 T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAGGACTTG
--AGGCCTNG
 T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGACTTG----
NNATTGGACTTTNGNN
 A C G T A C G T T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAGGACTTG--
--ACCACTTGAA
 T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G A C G T A C G T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------AAAGGACTTG
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C G A C G T A A C T G T A C G C G T A A G T C A G C T A C G T A T C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T