Information for 15-TTGAAGAGCTTTC (Motif 26)

A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
Reverse Opposite:
A T C G C G T A C G T A C G T A A C T G A G T C A C G T A G T C A C G T A C G T A G T C C G T A C G T A
p-value:1e-7
log p-value:-1.721e+01
Information Content per bp:1.951
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 25.6bp
Average Position of motif in Background42.2 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTGAAGAGCTTTC
NAATTTTACGAGNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTGAAGAGCTTTC
ANATTTTACGAGNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAGAGCTTTC--
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGAAGAGCTTTC
CTYRAGTGSY---
 A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGAAGAGCTTTC
-TTGAGTGSTT--
 A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGAAGAGCTTTC
TTCTAGAACGTTC
 A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGAAGAGCTTTC
BTBRAGTGSN---
 A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAGAGCTTTC
NTTTTACGAGN----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTGAAGAGCTTTC
TTCTAGAACGTTC
 A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

MSC/MA0665.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTGAAGAGCTTTC
---AACAGCTGTT
 A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G A T A C G T A T G C
A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T