Information for 7-TRTGCMATYYWGKYTC (Motif 10)

A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
Reverse Opposite:
A C T G C G T A C T G A G T C A G T A C C G A T C T G A C T A G T C G A A G C T A C G T A C T G A G T C C G T A A G C T C G T A
p-value:1e-12
log p-value:-2.802e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.7 +/- 20.4bp
Average Position of motif in Background33.8 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TRTGCMATYYWGKYTC
NATTGTGCAAT--------
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TRTGCMATYYWGKYTC
TTATGCAAT--------
 A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TRTGCMATYYWGKYTC
AGATGCAATCCC-----
 A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TRTGCMATYYWGKYTC
ACTATGCCAACCTACC--
 A C G T A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TRTGCMATYYWGKYTC
AATATGCAAATTAG----
 A C G T A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TRTGCMATYYWGKYTC
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TRTGCMATYYWGKYTC
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TRTGCMATYYWGKYTC
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TRTGCMATYYWGKYTC
-ATGCCAACC------
 A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TRTGCMATYYWGKYTC
TTATGCAAAT-------
 A C G T A C G T C T G A A C G T A C T G A G T C G T C A C T G A A G C T A G C T A G C T C G A T A C T G C A G T A G C T A C G T A G T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T