Information for 6-TTGACAGAGA (Motif 9)

A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A
Reverse Opposite:
A C G T G T A C C G A T A T G C A C G T A T C G A G C T T A G C G T C A G T C A
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.838
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif120.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets53.8 +/- 29.1bp
Average Position of motif in Background48.9 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TTGACAGAGA
TTGACAGC--
 A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTGACAGAGA
TTGACAGG--
 A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTGACAGAGA
TTGACAG---
 A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGACAGAGA-----
TTGACCGAGAATTCC
 A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGAGA---
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGAGA---
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGACAGAGA-----
NNNACCGAGAGTNNN
 A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGACAGAGA
YTGWCADY--
 A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGACAGAGA
VBTGWCAGCB-
 A C G T A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGAGA---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A A T G C G T C A T A C G C G T A C A T G C G T A A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T