Information for 5-CCGGGCCTTC (Motif 5)

A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A G T C A A C T G C T A G A T G C G T A C A G T C C T A G A C T G
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.861
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.5 +/- 20.7bp
Average Position of motif in Background55.2 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCGGGCCTTC
CTAGGCCT--
 A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCGGGCCTTC
CNAGGCCT--
 A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGCCTTC
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGGGCCTTC-
-GGGGATTTCC
 A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCGGGCCTTC-
-----GCTTCC
 A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGCCTTC
NRRGGGTCTT-
 A C G T A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCGGGCCTTC
AGCGCGCC---
 A C G T A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGCCTTC
ATGCCCGGGCATGT
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCGGGCCTTC
WDNCTGGGCA---
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCGGGCCTTC
BNTGDCCTTG
 A G T C A G T C A C T G A C T G A T C G A G T C A G T C A C G T A G C T A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G