p-value: | 1e-13 |
log p-value: | -3.140e+01 |
Information Content per bp: | 1.817 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.82% |
Number of Background Sequences with motif | 1.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 37.8 +/- 23.9bp |
Average Position of motif in Background | 29.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGKGTYKSTKACM- NAGGTCANTGACCT |
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PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGKGTYKSTKACM -AGGTCTCTAACC |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGKGTYKSTKACM- --TGTCTGDCACCT |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CGKGTYKSTKACM CGCGCCGGGTCACGTA-- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGKGTYKSTKACM- -CTGTCTGTCACCT |
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POL007.1_BREd/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGKGTYKSTKACM ---GTTTGTT--- |
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ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGKGTYKSTKACM- --RGTTAGTGCCCY |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | CGKGTYKSTKACM- --------TGACCT |
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PB0024.1_Gcm1_1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------CGKGTYKSTKACM NNNNATGCGGGTNNNN---- |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGKGTYKSTKACM GGNGCGNCTGTTNNN |
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