Information for 8-NCAACTACTT (Motif 13)

T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G C T G T C A A T C G C G A T A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.803
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif80.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets38.9 +/- 26.4bp
Average Position of motif in Background45.4 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--NCAACTACTT----
CNTTAAGTACTTAANG
 A C G T A C G T T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--NCAACTACTT-----
TACTAAGTACTTAAATG
 A C G T A C G T T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:NCAACTACTT--
--AAGCACTTAA
 T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---NCAACTACTT----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---NCAACTACTT----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-NCAACTACTT------
CATAACCACTTAACAAC
 A C G T T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:NCAACTACTT--
---ACCACTTAA
 T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

PH0028.1_En1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-NCAACTACTT-----
GCGAACTAATTAATGC
 A C G T T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:NCAACTACTT--
---ACCACTTAA
 T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:NCAACTACTT---
---ACCACTTGAA
 T C A G A G T C G T C A C G T A A T G C A C G T C T G A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A