Information for 9-GCCTGSRKRAWWC (Motif 12)

T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
Reverse Opposite:
C T A G C G A T C G A T A C G T A G T C G T C A G A C T A T C G A G T C C G T A A C T G A C T G A T G C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.7 +/- 23.7bp
Average Position of motif in Background35.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCTGSRKRAWWC
AGGCCTNG-------
 A C G T A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGSRKRAWWC
NTCCCCTCAGGGANT-
 A C G T A C G T A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGSRKRAWWC------
NNCCTGNAAAAAAAAAAAAA
 A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCTGSRKRAWWC
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCTGSRKRAWWC
AGGCCTAG-------
 A C G T A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCTGSRKRAWWC
ATTGCCTGAGGCGAA-
 A C G T A C G T A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGSRKRAWWC------
NNCCTGNAAAAAAAAAAAAA
 A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCCTGSRKRAWWC
-GCTGTG------
 T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.55
Offset:-9
Orientation:forward strand
Alignment:---------GCCTGSRKRAWWC
GGGGCCGAGGCCTG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCTGSRKRAWWC
CTGTCTGG-------
 A C G T A C G T T A C G G T A C A G T C C G A T A C T G A T G C C T G A C A G T C T A G C G T A C G T A C G T A A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T