Information for 5-TTHCTCCCCTCTSCCT (Motif 8)

A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T
Reverse Opposite:
C G T A A T C G A C T G T A G C C G T A A C T G C T G A C T A G T C A G A C T G T A C G C T G A A T C G C A G T T G C A G T C A
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.725
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.6 +/- 30.0bp
Average Position of motif in Background52.0 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTHCTCCCCTCTSCCT---
----TGACCTTTGCCCTAN
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTHCTCCCCTCTSCCT--
----TGACCTTTGCCCTA
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTHCTCCCCTCTSCCT
NNGCACCTTTCTCC--
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTHCTCCCCTCTSCCT-
-----CCCCTCCCCCAC
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTHCTCCCCTCTSCCT-
NTCNTCCCCTATNNGNN
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TTHCTCCCCTCTSCCT--
----TGACCTTTGCCCCA
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TTHCTCCCCTCTSCCT
---------GCTTCC-
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTHCTCCCCTCTSCCT---
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:TTHCTCCCCTCTSCCT--
--------CTGTTCCTGG
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:TTHCTCCCCTCTSCCT--
--------CACTTCCTCT
 A C G T A C G T G C T A A T G C A G C T A G T C G T A C A G T C A G T C A G C T A G T C A C G T A T C G A G T C A T G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T