Information for 2-CTDTTAMAAGCTTATT (Motif 5)

A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T
Reverse Opposite:
C T G A G T C A A G C T G T C A C T G A A C T G A G T C C G A T A C G T A C T G A C G T C T G A C G T A G A C T C G T A C T A G
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.729
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 19.0bp
Average Position of motif in Background21.8 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CTDTTAMAAGCTTATT
------CAAGCTT---
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTDTTAMAAGCTTATT--
-------AAGGATATNTN
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTDTTAMAAGCTTATT
NCGTATTATAATCNTA--
 A C G T A C G T A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CTDTTAMAAGCTTATT-
-------ATGAATATTC
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CTDTTAMAAGCTTATT--
--------AGCTCATTAT
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTDTTAMAAGCTTATT------
-----NNNACCTCATTATCNTN
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CTDTTAMAAGCTTATT
-------CAGCC----
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CTDTTAMAAGCTTATT---
---TTGTATGCAAATTAGA
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CTDTTAMAAGCTTATT---
---TTGTATGCAAATTAGA
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CTDTTAMAAGCTTATT--
-----ATATGCAAATNNN
 A G T C C G A T C T G A G C A T A G C T G T C A T G A C C G T A C G T A A C T G A G T C G A C T A C G T C T G A A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A