Information for 10-GTGATACACT (Motif 10)

A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T
Reverse Opposite:
C T G A A C T G C G A T A C T G A C G T C T G A C G A T A G T C C G T A A T G C
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.815
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif87.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets46.9 +/- 28.8bp
Average Position of motif in Background53.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six3/MA0631.1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GTGATACACT---
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GTGATACACT---
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTGATACACT---
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTGATACACT---
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTGATACACT
NTTGATACATT
 A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTGATACACT---
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTGATACACT---
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTGATACACT
AGGTGHCAGACA
 A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTGATACACT---
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGATACACT
-TGACTCA--
 A T C G A C G T A C T G C G T A G A C T G T C A A G T C C G T A A G T C G A C T
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T