Information for 1-TGDGTAAACA (Motif 1)

C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T G A T C G C T A
p-value:1e-256
log p-value:-5.901e+02
Information Content per bp:1.744
Number of Target Sequences with motif479.0
Percentage of Target Sequences with motif64.73%
Number of Background Sequences with motif5259.4
Percentage of Background Sequences with motif11.52%
Average Position of motif in Targets50.5 +/- 18.6bp
Average Position of motif in Background50.0 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TGDGTAAACA
AAAGTAAACA
 C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TGDGTAAACA
AAAGTAAACA
 C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--TGDGTAAACA---
NCWRWGTAAACANSV
 A C G T A C G T C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGDGTAAACA--
TATGTAAACANG
 C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-TGDGTAAACA----
CAAAGTAAACANNNN
 A C G T C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--TGDGTAAACA
NCTAAGTAAACA
 A C G T A C G T C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXI1/MA0042.2/Jaspar

Match Rank:7
Score:0.95
Offset:3
Orientation:forward strand
Alignment:TGDGTAAACA
---GTAAACA
 C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.94
Offset:2
Orientation:forward strand
Alignment:TGDGTAAACA
--DGTAAACA
 C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGDGTAAACA
WAAGTAAAYA
 C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXO4/MA0848.1/Jaspar

Match Rank:10
Score:0.94
Offset:3
Orientation:forward strand
Alignment:TGDGTAAACA
---GTAAACA
 C G A T C T A G C G T A T C A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A