Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-262 | -6.045e+02 | 0.0000 | 450.0 | 60.73% | 4225.9 | 9.30% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-257 | -5.927e+02 | 0.0000 | 478.0 | 64.51% | 5166.3 | 11.36% | motif file (matrix) |
svg |
3 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-253 | -5.828e+02 | 0.0000 | 436.0 | 58.84% | 4064.6 | 8.94% | motif file (matrix) |
svg |
4 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-250 | -5.763e+02 | 0.0000 | 393.0 | 53.04% | 3057.7 | 6.73% | motif file (matrix) |
svg |
5 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-215 | -4.964e+02 | 0.0000 | 265.0 | 35.76% | 1199.1 | 2.64% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-201 | -4.629e+02 | 0.0000 | 352.0 | 47.50% | 3106.0 | 6.83% | motif file (matrix) |
svg |
7 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-164 | -3.798e+02 | 0.0000 | 336.0 | 45.34% | 3585.7 | 7.89% | motif file (matrix) |
svg |
8 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-152 | -3.516e+02 | 0.0000 | 345.0 | 46.56% | 4201.3 | 9.24% | motif file (matrix) |
svg |
9 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-141 | -3.262e+02 | 0.0000 | 254.0 | 34.28% | 2145.2 | 4.72% | motif file (matrix) |
svg |
10 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-131 | -3.027e+02 | 0.0000 | 314.0 | 42.38% | 3975.4 | 8.74% | motif file (matrix) |
svg |
11 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-127 | -2.926e+02 | 0.0000 | 280.0 | 37.79% | 3150.6 | 6.93% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-112 | -2.587e+02 | 0.0000 | 203.0 | 27.40% | 1674.5 | 3.68% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-86 | -1.982e+02 | 0.0000 | 304.0 | 41.03% | 5543.5 | 12.19% | motif file (matrix) |
svg |
14 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-26 | -6.002e+01 | 0.0000 | 33.0 | 4.45% | 143.3 | 0.32% | motif file (matrix) |
svg |
15 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-24 | -5.687e+01 | 0.0000 | 41.0 | 5.53% | 282.7 | 0.62% | motif file (matrix) |
svg |
16 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-7 | -1.762e+01 | 0.0000 | 119.0 | 16.06% | 4359.1 | 9.59% | motif file (matrix) |
svg |
17 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-7 | -1.720e+01 | 0.0000 | 109.0 | 14.71% | 3910.5 | 8.60% | motif file (matrix) |
svg |
18 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-7 | -1.696e+01 | 0.0000 | 130.0 | 17.54% | 4955.3 | 10.90% | motif file (matrix) |
svg |
19 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-6 | -1.574e+01 | 0.0000 | 114.0 | 15.38% | 4270.7 | 9.39% | motif file (matrix) |
svg |
20 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.403e+01 | 0.0000 | 93.0 | 12.55% | 3392.4 | 7.46% | motif file (matrix) |
svg |
21 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-5 | -1.319e+01 | 0.0000 | 61.0 | 8.23% | 1965.9 | 4.32% | motif file (matrix) |
svg |
22 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.226e+01 | 0.0001 | 20.0 | 2.70% | 369.1 | 0.81% | motif file (matrix) |
svg |
23 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.149e+01 | 0.0002 | 51.0 | 6.88% | 1627.6 | 3.58% | motif file (matrix) |
svg |
24 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.082e+01 | 0.0003 | 53.0 | 7.15% | 1759.6 | 3.87% | motif file (matrix) |
svg |
25 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.047e+01 | 0.0004 | 16.0 | 2.16% | 286.7 | 0.63% | motif file (matrix) |
svg |
26 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.013e+01 | 0.0006 | 50.0 | 6.75% | 1670.6 | 3.67% | motif file (matrix) |
svg |
27 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-4 | -9.995e+00 | 0.0006 | 39.0 | 5.26% | 1191.8 | 2.62% | motif file (matrix) |
svg |
28 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-4 | -9.757e+00 | 0.0008 | 62.0 | 8.37% | 2256.5 | 4.96% | motif file (matrix) |
svg |
29 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-4 | -9.331e+00 | 0.0011 | 81.0 | 10.93% | 3224.3 | 7.09% | motif file (matrix) |
svg |
30 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-4 | -9.255e+00 | 0.0012 | 12.0 | 1.62% | 191.6 | 0.42% | motif file (matrix) |
svg |
31 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-3 | -9.098e+00 | 0.0013 | 24.0 | 3.24% | 616.6 | 1.36% | motif file (matrix) |
svg |
32 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.999e+00 | 0.0014 | 19.0 | 2.56% | 431.5 | 0.95% | motif file (matrix) |
svg |
33 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -8.881e+00 | 0.0015 | 35.0 | 4.72% | 1082.6 | 2.38% | motif file (matrix) |
svg |
34 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -8.632e+00 | 0.0019 | 167.0 | 22.54% | 7884.8 | 17.34% | motif file (matrix) |
svg |
35 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.614e+00 | 0.0019 | 38.0 | 5.13% | 1230.1 | 2.71% | motif file (matrix) |
svg |
36 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -8.244e+00 | 0.0027 | 26.0 | 3.51% | 735.6 | 1.62% | motif file (matrix) |
svg |
37 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -8.110e+00 | 0.0030 | 73.0 | 9.85% | 2947.7 | 6.48% | motif file (matrix) |
svg |
38 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.035e+00 | 0.0031 | 16.0 | 2.16% | 355.1 | 0.78% | motif file (matrix) |
svg |
39 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.003e+00 | 0.0031 | 38.0 | 5.13% | 1270.3 | 2.79% | motif file (matrix) |
svg |
40 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.969e+00 | 0.0031 | 13.0 | 1.75% | 253.5 | 0.56% | motif file (matrix) |
svg |
41 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.950e+00 | 0.0031 | 43.0 | 5.80% | 1503.9 | 3.31% | motif file (matrix) |
svg |
42 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.820e+00 | 0.0035 | 32.0 | 4.32% | 1014.1 | 2.23% | motif file (matrix) |
svg |
43 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.598e+00 | 0.0042 | 17.0 | 2.29% | 407.4 | 0.90% | motif file (matrix) |
svg |
44 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -7.392e+00 | 0.0051 | 67.0 | 9.04% | 2720.8 | 5.98% | motif file (matrix) |
svg |
45 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.115e+00 | 0.0066 | 38.0 | 5.13% | 1333.1 | 2.93% | motif file (matrix) |
svg |
46 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.805e+00 | 0.0088 | 33.0 | 4.45% | 1125.1 | 2.47% | motif file (matrix) |
svg |
47 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.552e+00 | 0.0110 | 51.0 | 6.88% | 2006.4 | 4.41% | motif file (matrix) |
svg |
48 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.522e+00 | 0.0112 | 51.0 | 6.88% | 2009.9 | 4.42% | motif file (matrix) |
svg |
49 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.503e+00 | 0.0112 | 18.0 | 2.43% | 491.1 | 1.08% | motif file (matrix) |
svg |
50 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.442e+00 | 0.0116 | 35.0 | 4.72% | 1244.6 | 2.74% | motif file (matrix) |
svg |
51 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -6.307e+00 | 0.0130 | 109.0 | 14.71% | 5072.9 | 11.16% | motif file (matrix) |
svg |
52 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -6.155e+00 | 0.0149 | 14.0 | 1.89% | 348.6 | 0.77% | motif file (matrix) |
svg |
53 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.129e+00 | 0.0150 | 13.0 | 1.75% | 311.1 | 0.68% | motif file (matrix) |
svg |
54 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -6.084e+00 | 0.0154 | 50.0 | 6.75% | 2003.5 | 4.41% | motif file (matrix) |
svg |
55 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.067e+00 | 0.0154 | 55.0 | 7.42% | 2256.5 | 4.96% | motif file (matrix) |
svg |
56 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.827e+00 | 0.0192 | 16.0 | 2.16% | 441.4 | 0.97% | motif file (matrix) |
svg |
57 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.745e+00 | 0.0204 | 29.0 | 3.91% | 1017.0 | 2.24% | motif file (matrix) |
svg |
58 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-2 | -5.741e+00 | 0.0204 | 18.0 | 2.43% | 528.8 | 1.16% | motif file (matrix) |
svg |
59 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -5.728e+00 | 0.0204 | 28.0 | 3.78% | 972.5 | 2.14% | motif file (matrix) |
svg |
60 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.512e+00 | 0.0245 | 166.0 | 22.40% | 8400.3 | 18.48% | motif file (matrix) |
svg |
61 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -5.439e+00 | 0.0259 | 33.0 | 4.45% | 1230.5 | 2.71% | motif file (matrix) |
svg |
62 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.330e+00 | 0.0284 | 181.0 | 24.43% | 9299.9 | 20.46% | motif file (matrix) |
svg |
63 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.193e+00 | 0.0321 | 24.0 | 3.24% | 826.4 | 1.82% | motif file (matrix) |
svg |
64 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.171e+00 | 0.0323 | 71.0 | 9.58% | 3199.7 | 7.04% | motif file (matrix) |
svg |
65 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -5.061e+00 | 0.0355 | 37.0 | 4.99% | 1459.2 | 3.21% | motif file (matrix) |
svg |
66 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -5.031e+00 | 0.0360 | 59.0 | 7.96% | 2585.5 | 5.69% | motif file (matrix) |
svg |
67 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.022e+00 | 0.0360 | 17.0 | 2.29% | 524.1 | 1.15% | motif file (matrix) |
svg |
68 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -4.852e+00 | 0.0418 | 77.0 | 10.39% | 3569.0 | 7.85% | motif file (matrix) |
svg |
69 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -4.782e+00 | 0.0442 | 4.0 | 0.54% | 48.8 | 0.11% | motif file (matrix) |
svg |
70 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.757e+00 | 0.0447 | 51.0 | 6.88% | 2203.4 | 4.85% | motif file (matrix) |
svg |
71 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -4.687e+00 | 0.0472 | 20.0 | 2.70% | 678.9 | 1.49% | motif file (matrix) |
svg |
72 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -4.646e+00 | 0.0485 | 34.0 | 4.59% | 1351.8 | 2.97% | motif file (matrix) |
svg |
73 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -4.619e+00 | 0.0492 | 13.0 | 1.75% | 375.3 | 0.83% | motif file (matrix) |
svg |