Information for 3-CTTTAAAATTATTTAC (Motif 8)

A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C
Reverse Opposite:
C T A G A C G T C G T A C G T A C G T A A C G T G C T A C G T A C G A T A C G T A C G T A G C T G T C A G T C A C G T A A C T G
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.773
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.3 +/- 26.2bp
Average Position of motif in Background36.8 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTTTAAAATTATTTAC----
---GAAAATTAATTACTTCG
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0120.1_Nkx6-3/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTTTAAAATTATTTAC----
---GAAAATTAATTACTTTG
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

Lhx3/MA0135.1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTTTAAAATTATTTAC--
-----AAATTAATTAATC
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PH0072.1_Hoxc8/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTTTAAAATTATTTAC-----
-----ACNNTAATTACNNCAN
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PH0062.1_Hoxb7/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTTTAAAATTATTTAC---
---TNNCATTAATTANTNC
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

mix-a/MA0621.1/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CTTTAAAATTATTTAC-
------AATTAATTAGT
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTTTAAAATTATTTAC-----
----NNAATTAATTAAAAANN
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0147.1_Pou3f2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTTTAAAATTATTTAC----
---GATAATTAATTAGTTTG
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

PH0071.1_Hoxc6/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTTTAAAATTATTTAC-----
----CAAATTAATTAATAAAA
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

PH0149.1_Pou3f4/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTTTAAAATTATTTAC---
--AATTAATTAATTAATTC
 A G T C C G A T C A G T A C G T C T G A G T C A G T C A C G T A C G A T C G A T C G T A G A C T A C G T A C G T C G T A G A T C A C G T A C G T A C G T
A C G T A C G T C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C