Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-269 | -6.216e+02 | 0.0000 | 410.0 | 55.41% | 1280.3 | 6.78% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-262 | -6.034e+02 | 0.0000 | 459.0 | 62.03% | 1868.9 | 9.89% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-261 | -6.024e+02 | 0.0000 | 492.0 | 66.49% | 2286.6 | 12.11% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-248 | -5.726e+02 | 0.0000 | 440.0 | 59.46% | 1781.4 | 9.43% | motif file (matrix) |
svg |
5 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-204 | -4.712e+02 | 0.0000 | 266.0 | 35.95% | 558.9 | 2.96% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-175 | -4.041e+02 | 0.0000 | 336.0 | 45.41% | 1377.4 | 7.29% | motif file (matrix) |
svg |
7 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-174 | -4.026e+02 | 0.0000 | 371.0 | 50.14% | 1785.0 | 9.45% | motif file (matrix) |
svg |
8 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-170 | -3.923e+02 | 0.0000 | 343.0 | 46.35% | 1509.8 | 7.99% | motif file (matrix) |
svg |
9 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-149 | -3.448e+02 | 0.0000 | 334.0 | 45.14% | 1653.7 | 8.75% | motif file (matrix) |
svg |
10 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-144 | -3.323e+02 | 0.0000 | 265.0 | 35.81% | 971.9 | 5.14% | motif file (matrix) |
svg |
11 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-143 | -3.303e+02 | 0.0000 | 299.0 | 40.41% | 1327.8 | 7.03% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-119 | -2.746e+02 | 0.0000 | 212.0 | 28.65% | 715.7 | 3.79% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-98 | -2.263e+02 | 0.0000 | 321.0 | 43.38% | 2308.5 | 12.22% | motif file (matrix) |
svg |
14 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-25 | -5.838e+01 | 0.0000 | 39.0 | 5.27% | 99.4 | 0.53% | motif file (matrix) |
svg |
15 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-19 | -4.519e+01 | 0.0000 | 32.0 | 4.32% | 90.8 | 0.48% | motif file (matrix) |
svg |
16 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-8 | -1.915e+01 | 0.0000 | 122.0 | 16.49% | 1824.4 | 9.66% | motif file (matrix) |
svg |
17 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-8 | -1.915e+01 | 0.0000 | 111.0 | 15.00% | 1606.4 | 8.50% | motif file (matrix) |
svg |
18 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-7 | -1.722e+01 | 0.0000 | 130.0 | 17.57% | 2052.3 | 10.86% | motif file (matrix) |
svg |
19 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-5 | -1.286e+01 | 0.0000 | 110.0 | 14.86% | 1802.5 | 9.54% | motif file (matrix) |
svg |
20 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.273e+01 | 0.0001 | 21.0 | 2.84% | 162.2 | 0.86% | motif file (matrix) |
svg |
21 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-5 | -1.249e+01 | 0.0001 | 87.0 | 11.76% | 1344.5 | 7.12% | motif file (matrix) |
svg |
22 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.075e+01 | 0.0004 | 88.0 | 11.89% | 1429.7 | 7.57% | motif file (matrix) |
svg |
23 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.074e+01 | 0.0004 | 54.0 | 7.30% | 753.6 | 3.99% | motif file (matrix) |
svg |
24 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-4 | -1.055e+01 | 0.0004 | 120.0 | 16.22% | 2117.1 | 11.21% | motif file (matrix) |
svg |
25 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.766e+00 | 0.0008 | 15.0 | 2.03% | 113.2 | 0.60% | motif file (matrix) |
svg |
26 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -9.537e+00 | 0.0010 | 58.0 | 7.84% | 868.0 | 4.59% | motif file (matrix) |
svg |
27 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-4 | -9.349e+00 | 0.0012 | 24.0 | 3.24% | 252.9 | 1.34% | motif file (matrix) |
svg |
28 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -9.222e+00 | 0.0013 | 36.0 | 4.86% | 460.5 | 2.44% | motif file (matrix) |
svg |
29 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -8.764e+00 | 0.0020 | 51.0 | 6.89% | 755.2 | 4.00% | motif file (matrix) |
svg |
30 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -8.493e+00 | 0.0025 | 72.0 | 9.73% | 1189.9 | 6.30% | motif file (matrix) |
svg |
31 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.391e+00 | 0.0027 | 47.0 | 6.35% | 689.3 | 3.65% | motif file (matrix) |
svg |
32 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -8.197e+00 | 0.0031 | 44.0 | 5.95% | 637.3 | 3.37% | motif file (matrix) |
svg |
33 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -8.132e+00 | 0.0032 | 24.0 | 3.24% | 274.8 | 1.45% | motif file (matrix) |
svg |
34 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.884e+00 | 0.0040 | 17.0 | 2.30% | 165.1 | 0.87% | motif file (matrix) |
svg |
35 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.731e+00 | 0.0046 | 13.0 | 1.76% | 108.6 | 0.58% | motif file (matrix) |
svg |
36 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.655e+00 | 0.0048 | 12.0 | 1.62% | 95.7 | 0.51% | motif file (matrix) |
svg |
37 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.517e+00 | 0.0054 | 30.0 | 4.05% | 393.4 | 2.08% | motif file (matrix) |
svg |
38 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -7.251e+00 | 0.0068 | 53.0 | 7.16% | 848.9 | 4.49% | motif file (matrix) |
svg |
39 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-3 | -7.200e+00 | 0.0070 | 2.0 | 0.27% | 0.9 | 0.00% | motif file (matrix) |
svg |
40 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.151e+00 | 0.0071 | 35.0 | 4.73% | 496.1 | 2.63% | motif file (matrix) |
svg |
41 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.892e+00 | 0.0090 | 47.0 | 6.35% | 740.9 | 3.92% | motif file (matrix) |
svg |
42 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -6.773e+00 | 0.0099 | 114.0 | 15.41% | 2193.4 | 11.61% | motif file (matrix) |
svg |
43 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.740e+00 | 0.0100 | 37.0 | 5.00% | 547.7 | 2.90% | motif file (matrix) |
svg |
44 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.520e+00 | 0.0122 | 10.0 | 1.35% | 80.7 | 0.43% | motif file (matrix) |
svg |
45 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.444e+00 | 0.0129 | 55.0 | 7.43% | 922.5 | 4.88% | motif file (matrix) |
svg |
46 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.234e+00 | 0.0155 | 27.0 | 3.65% | 371.2 | 1.97% | motif file (matrix) |
svg |
47 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.210e+00 | 0.0156 | 26.0 | 3.51% | 353.9 | 1.87% | motif file (matrix) |
svg |
48 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.117e+00 | 0.0167 | 33.0 | 4.46% | 489.9 | 2.59% | motif file (matrix) |
svg |
49 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.905e+00 | 0.0203 | 16.0 | 2.16% | 182.9 | 0.97% | motif file (matrix) |
svg |
50 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.696e+00 | 0.0245 | 56.0 | 7.57% | 977.3 | 5.17% | motif file (matrix) |
svg |
51 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.612e+00 | 0.0261 | 51.0 | 6.89% | 875.6 | 4.64% | motif file (matrix) |
svg |
52 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.492e+00 | 0.0288 | 15.0 | 2.03% | 173.1 | 0.92% | motif file (matrix) |
svg |
53 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.439e+00 | 0.0298 | 41.0 | 5.54% | 675.0 | 3.57% | motif file (matrix) |
svg |
54 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.152e+00 | 0.0390 | 30.0 | 4.05% | 462.3 | 2.45% | motif file (matrix) |
svg |
55 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -5.114e+00 | 0.0398 | 24.0 | 3.24% | 346.2 | 1.83% | motif file (matrix) |
svg |
56 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.054e+00 | 0.0415 | 45.0 | 6.08% | 774.3 | 4.10% | motif file (matrix) |
svg |
57 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.032e+00 | 0.0417 | 156.0 | 21.08% | 3301.3 | 17.48% | motif file (matrix) |
svg |
58 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -4.822e+00 | 0.0505 | 59.0 | 7.97% | 1087.7 | 5.76% | motif file (matrix) |
svg |
59 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-2 | -4.771e+00 | 0.0523 | 17.0 | 2.30% | 224.5 | 1.19% | motif file (matrix) |
svg |
60 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -4.760e+00 | 0.0523 | 30.0 | 4.05% | 476.2 | 2.52% | motif file (matrix) |
svg |
61 |
| HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer | 1e-2 | -4.652e+00 | 0.0569 | 10.0 | 1.35% | 105.8 | 0.56% | motif file (matrix) |
svg |