Information for 12-TGTTGTTCTG (Motif 19)

A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A G T C C G T A
p-value:1e-5
log p-value:-1.343e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 27.8bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGTTCTG--
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGTTCTG----
GTNTTGTTGTGANNT
 A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTTCTG----
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGTTGTTCTG---
TAATTGTTCTAAAC
 A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTTCTG--
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTTCTG--
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTTCTG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTTCTG---
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTTGTTCTG
CCATTGTTNY-
 A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGTTGTTCTG--
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A