Information for 10-SGCGTCSCGG (Motif 16)

A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A T C G A C T G C G T A A T G C A C T G A G T C T A G C
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.896
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.0 +/- 22.3bp
Average Position of motif in Background55.3 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-SGCGTCSCGG----
ACCACTCTCGGTCAC
 A C G T A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:SGCGTCSCGG
--AGTCACGC
 A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SGCGTCSCGG----
AGTATTCTCGGTTGC
 A C G T A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:SGCGTCSCGG-----
TCCGTCGCTTAAAAG
 A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----SGCGTCSCGG-
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T A C G T A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

CREB1/MA0018.2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-SGCGTCSCGG
TGACGTCA---
 A C G T A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--SGCGTCSCGG
GTGACGTCACCG
 A C G T A C G T A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SGCGTCSCGG
-GCTTCC---
 A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SGCGTCSCGG--
-NNTTCCCGCCC
 A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G A C G T A C G T
A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:SGCGTCSCGG
TGCGTG----
 A T C G C T A G A G T C A T C G A C G T A G T C T A G C A G T C A C T G A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T