Information for 7-CTCAGATGGC (Motif 13)

A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
Reverse Opposite:
A C T G G T A C A G T C C G T A G A C T A G T C A C G T A C T G C T G A C T A G
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.851
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets42.5 +/- 27.8bp
Average Position of motif in Background44.6 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTCAGATGGC
AACAGATGGC
 A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CTCAGATGGC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTCAGATGGC
AACAGATGGT
 A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTCAGATGGC
NNVVCAGCTGBN
 A C G T A C G T A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCAGATGGC
NAHCAGCTGD-
 A C G T A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCAGATGGC
VNAVCAGCTGGC
 A C G T A C G T A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTCAGATGGC
AACAKATGGY
 A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCAGATGGC
GTCACGTGGM
 A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCAGATGGC
GKVTCADRTTWC
 A C G T A C G T A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCAGATGGC
NNCAGGTGNN
 A G T C A G C T A G T C C G T A C T A G C G T A A C G T C T A G C A T G A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G