Information for 5-TTTTATABAVTCTTAA (Motif 12)

A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
Reverse Opposite:
A C G T A G C T C G T A C G T A C T A G C G T A A G T C C G A T T A C G A C G T C G T A A C G T C G T A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.836
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 25.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TTTTATABAVTCTTAA
NNNNNNCTTTTATAN--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TTTTATABAVTCTTAA
NNNNNNCTTTTATAN--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATABAVTCTTAA
NNANTTTTATTGGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTTTATABAVTCTTAA
TNTTATCTTATCTT--
 A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTTTATABAVTCTTAA
CCTTTTATAGNC------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTATABAVTCTTAA
NTNAATTTTATTGNATT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTTTATABAVTCTTAA
--TTCTAGAACGTTC-
 A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
A C G T A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATABAVTCTTAA
NNAATTTTATTGGNTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTTTATABAVTCTTAA
ATTTTCCATT-------
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTTTATABAVTCTTAA
TTTTATTRGN------
 A C G T A C G T A C G T A C G T G T C A A C G T C G T A A G T C C G T A T A C G C G A T A G T C A C G T A C G T C T G A C G T A
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T