Information for 5-TTTACTAGGC (Motif 8)

A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
Reverse Opposite:
C T A G A G T C A G T C C G A T C G T A C A T G C G A T C G T A C G T A C G T A
p-value:1e-12
log p-value:-2.861e+01
Information Content per bp:1.866
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif104.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets57.6 +/- 25.5bp
Average Position of motif in Background46.8 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTAGGC
NTTTTACGAGN-
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTACTAGGC
TTTTATKRGG-
 A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTAGGC--
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTACTAGGC
TTTAATTGCN
 A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTAGGC--
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTACTAGGC
GTTAACTAGN-
 A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTACTAGGC
TTTTATTRGN-
 A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTAGGC
TTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACTAGGC-
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTAGGC
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T C G T A C T A G C T A G A G T C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T