Information for 3-AWTGCCCACWRMT (Motif 6)

C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
Reverse Opposite:
C T G A A C G T A G C T C G A T C T A G A C G T A C T G A C T G C T A G A G T C C G T A C G T A A C G T
p-value:1e-13
log p-value:-3.221e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.8 +/- 22.9bp
Average Position of motif in Background64.5 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AWTGCCCACWRMT
-ATGCCCACC---
 C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AWTGCCCACWRMT
-CTGCCCGCA---
 C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AWTGCCCACWRMT
-ATGCCAACC---
 C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AWTGCCCACWRMT
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AWTGCCCACWRMT
--TGCCCAGNHW-
 C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AWTGCCCACWRMT
GGTGCCAAGT---
 C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AWTGCCCACWRMT-
NNTTTGCACACGGCCC
 A C G T A C G T C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AWTGCCCACWRMT
HTTTCCCASG---
 C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AWTGCCCACWRMT
-NWAACCACADNN
 C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AWTGCCCACWRMT--
CGAAGCACACAAAATA
 A C G T C G T A C G A T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A C T G A G T C A A G C T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A