Information for 20-CATGGTCTGTCCTTAG (Motif 28)

A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
Reverse Opposite:
A G T C A C G T C T G A C G T A A C T G C T A G G T C A A G T C C G T A T C A G C G T A A G T C G T A C C G T A A C G T A C T G
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.896
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 32.2bp
Average Position of motif in Background44.2 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG
------CTGACCTTTG
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG
-------TGACCTYA-
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG
------GTGACCTT--
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG
------CTGTTCCTGG
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG------
-------TGWCCTCARNTGACC
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG
-----BNTGDCCTTG-
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CATGGTCTGTCCTTAG
CTCATTGTC---------
 A C G T A C G T A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG----
------NTGCCCANNGGTNA
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CATGGTCTGTCCTTAG
CCATTGTTYB-------
 A C G T A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CATGGTCTGTCCTTAG-
-------TGACCTTGAN
 A G T C C G T A A C G T A C T G A C T G C G A T A G T C C G A T A C T G A C G T A G T C A G T C C G A T A G C T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A