Information for 1-AAWGYAAACA (Motif 1)

C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C G T A C G T C T A G G T A C G C A T G A C T C G A T
p-value:1e-36
log p-value:-8.398e+01
Information Content per bp:1.794
Number of Target Sequences with motif167.0
Percentage of Target Sequences with motif24.67%
Number of Background Sequences with motif4024.1
Percentage of Background Sequences with motif8.35%
Average Position of motif in Targets48.8 +/- 24.3bp
Average Position of motif in Background49.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AAWGYAAACA
AAAGTAAACA
 C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AAWGYAAACA
AAAGTAAACA
 C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-AAWGYAAACA----
CAAAGTAAACANNNN
 A C G T C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAWGYAAACA
WAAGTAAAYA
 C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AAWGYAAACA--
TAAGTAAACAAA
 C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:AAWGYAAACA
-AAATAAACA
 C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--AAWGYAAACA
NCTAAGTAAACA
 A C G T A C G T C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.86
Offset:0
Orientation:forward strand
Alignment:AAWGYAAACA--
WWTRTAAACAVG
 C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AAWGYAAACA---
CAAAAGTAAACAAAG
 A C G T A C G T C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--AAWGYAAACA-----
AAAATGTAAACAAACAG
 A C G T A C G T C G T A C T G A C G T A C A T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G