Information for 6-CTGCWSWCCTRTCTCW (Motif 7)

G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A
Reverse Opposite:
C G A T A T C G C G T A A T C G C T G A A G C T T G C A A C T G A C T G C G T A A T C G C G A T C T A G A T G C C G T A C A T G
p-value:1e-12
log p-value:-2.865e+01
Information Content per bp:1.623
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif135.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.6 +/- 17.0bp
Average Position of motif in Background48.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGCWSWCCTRTCTCW
--NNGCACCTTTCTCC
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A
A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:8
Orientation:forward strand
Alignment:CTGCWSWCCTRTCTCW
--------CTGTCTGG
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Gata4/MA0482.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGCWSWCCTRTCTCW-
------TCTTATCTCCC
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGCWSWCCTRTCTCW-
-------GCCATCTGTT
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGCWSWCCTRTCTCW
------VBSYGTCTGG
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGCWSWCCTRTCTCW-
-------ACCATCTGTT
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTGCWSWCCTRTCTCW
-----TTCTTATCTGT
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A
A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGCWSWCCTRTCTCW
--CCTCACCTG-----
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CTGCWSWCCTRTCTCW
NSTTATCTSHNNHNASATCT--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A
C G A T T A G C G A C T G C A T C G T A A C G T A G T C C G A T A T C G G A C T C A T G A G C T G C A T A T C G G T C A T A G C C G T A A C G T A G T C C G A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTGCWSWCCTRTCTCW-----
----NNTNNTGTCTGGNNTNG
 G T A C C G A T T A C G A G T C G C T A T A G C G C A T T G A C A G T C A C G T C T G A A G C T A T G C A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G