Information for 3-CCWAWAGAAACTTTTD (Motif 4)

A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
Reverse Opposite:
G A C T C G T A T G C A C G T A C G T A A T C G A C G T C G A T G A C T G T A C A G C T G C A T A C G T C G T A A C T G A T C G
p-value:1e-14
log p-value:-3.267e+01
Information Content per bp:1.668
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif65.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.7 +/- 26.7bp
Average Position of motif in Background48.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCWAWAGAAACTTTTD
---AAACAAACATTC-
 A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCWAWAGAAACTTTTD
GAAAMTGAAACT----
 A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCWAWAGAAACTTTTD
TGCCAAAATAAACANN--
 A C G T A C G T A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCWAWAGAAACTTTTD
GGAAANTGAAACTNA--
 A C G T A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCWAWAGAAACTTTTD
GAGAACCGAAACTG---
 A C G T A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCWAWAGAAACTTTTD
--TAAGTAAACAAA--
 A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCWAWAGAAACTTTTD
GAAACTGAAACT----
 A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCWAWAGAAACTTTTD
----AATAAACAATN-
 A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCWAWAGAAACTTTTD
--TATGTAAATAT---
 A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCWAWAGAAACTTTTD
ATAAACCGAAACCAA--
 A C G T A T G C G T A C C G A T C G T A C G T A T C G A A C T G C T G A G C T A C G T A A T G C G C A T C G A T A C G T C G A T C T G A
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T