Information for 4-ATTTATTGACCCA (Motif 3)

C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
Reverse Opposite:
A C G T C T A G C A T G A C T G A C G T G T A C C G T A C G T A A C G T C G T A G T C A C G T A G C A T
p-value:1e-14
log p-value:-3.351e+01
Information Content per bp:1.771
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif74.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.0 +/- 21.4bp
Average Position of motif in Background47.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATTGACCCA-
NAAANTTATTGAANCAN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATTGACCCA-
NNAATTAATGACCNNN
 A C G T A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATTGACCCA
NTGATTTATGGCC---
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATTGACCCA
NAATTTTATTACCNNN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTTATTGACCCA
NNANTTTTATTGGNNN-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATTGACCCA
TGATTTATGGCC---
 A C G T A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGACCCA
NTTTTATTGG----
 A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTTATTGACCCA
TTTTATTGC----
 C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTATTGACCCA
NTNAATTTTATTGNATT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGACCCA
TTTTTATTGG----
 A C G T C G T A A C G T A C G T A C G T T C G A G A C T C G A T A C T G G T C A A G T C G A T C G A T C C G T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T